PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32531.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Nin-like
Protein Properties Length: 274aa    MW: 32085.1 Da    PI: 5.4731
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32531.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK80.71.5e-25141190352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 k +s +++s+yF++pi +AA+eL+v+lT LK++CR++GI+RWPhRk+ sl
  KHN32531.1 141 KMLSRKTVSQYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLLSL 190
                 78999*****************************************9886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.325123210IPR003035RWP-RK domain
PfamPF020426.5E-21143190IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MENQQLTFWK SNYEIDDYPF APTCQFSSYD YCSWGNANDG YHWPYEFPLQ DSYLDAIPYM  60
KCYYPHDILY ESTLPIEPTS LSIRDYDFSD VKNVLSALNE TDGSDHKPAF SSCNDGESVD  120
EMQEDLKGKK CREEGISSSA KMLSRKTVSQ YFYMPISQAA RELNVGLTHL KKRCRELGIQ  180
RWPHRKLLSL QTLIKNIQEQ RETGGHENDE KTRAAIEILE REQRKVEEMP DLELEDNTRR  240
LRQACFKANY KKRKLMGMRL IEPDSSLSGL FNKY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150352e-43AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006578571.10.0PREDICTED: protein RKD1-like
TrEMBLA0A0B2RDL10.0A0A0B2RDL1_GLYSO; Protein RKD1
TrEMBLA0A0R0K9800.0A0A0R0K980_SOYBN; Uncharacterized protein
STRINGGLYMA06G20881.11e-174(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61843052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-55RWP-RK domain-containing protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]